The Coordination and Sustainability of International Mouse Informatics Resources (CASIMIR) project carried out a pilot study that demonstrated how (parts of) existing databases can be made accessible in a standardized way and data processed using the MOLGENIS toolkit, BioMART and Taverna.
The MOLGENIS toolkit was used to generate WSDL services to access the databases. These were then included in a Taverna workflow along with BioMart processors.
An example workflow can be found on myExperiment.
